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Ah yes! In terms of variables I feel EMCI, LMCI, MCI, AD, SZ, ADHD, BP, FTD etc. is probably cleaner, and then we have a little dictionary somewhere? Or do you think full labels is preferable?
This might be a bit complicated where they have an overarching diagnosis (dementia) and a sub-diagnosis (e.g. AD). My preference for those cases would be for our variables to output the sub-diagnoses only, and then any grouping etc can be done later. What do you think?
I would imaging having a shared json file for the definition of the labels:
{"EMCI": "full name of the diagnosis. ",
"ADHD": "full name of the diagnosis. ",
...
}
And for each project where they can have their own coding, we can just write a dictionary to convert the two manually:
for example they have 0 for control, 1 for adhd
{0: "ADHD", 1: "HC"}
For grouping, would you prefer this to be done in the file also? or do you feel this is more project specific?
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clarkenj commentedon Feb 8, 2024
Ah yes! In terms of variables I feel EMCI, LMCI, MCI, AD, SZ, ADHD, BP, FTD etc. is probably cleaner, and then we have a little dictionary somewhere? Or do you think full labels is preferable?
This might be a bit complicated where they have an overarching diagnosis (dementia) and a sub-diagnosis (e.g. AD). My preference for those cases would be for our variables to output the sub-diagnoses only, and then any grouping etc can be done later. What do you think?
htwangtw commentedon Feb 8, 2024
Sounds great!
I would imaging having a shared json file for the definition of the labels:
And for each project where they can have their own coding, we can just write a dictionary to convert the two manually:
for example they have 0 for control, 1 for adhd
{0: "ADHD", 1: "HC"}
For grouping, would you prefer this to be done in the file also? or do you feel this is more project specific?
clarkenj commentedon Feb 8, 2024
Perfect! I think grouping should be project specific.
clarkenj commentedon Feb 8, 2024
I would perhaps go for CON over HC?
htwangtw commentedon Feb 8, 2024
sure! if you can compile this json file together that would be great!
clarkenj commentedon Feb 8, 2024
Sure thing!