Skip to content
View ShixiangWang's full-sized avatar
🀄
Open Source Better Science
🀄
Open Source Better Science
906 followers · 575 following

Achievements

Achievement: Pair ExtraordinaireAchievement: Galaxy BrainAchievement: Starstruckx2Achievement: YOLOAchievement: QuickdrawAchievement: Pull Sharkx3Achievement: Arctic Code Vault Contributor

Achievements

Achievement: Pair ExtraordinaireAchievement: Galaxy BrainAchievement: Starstruckx2Achievement: YOLOAchievement: QuickdrawAchievement: Pull Sharkx3Achievement: Arctic Code Vault Contributor

Highlights

  • Pro

Organizations

@ropensci @conda-forge @openbiox @OncoHarmony-Network @Traitome @oxo-flow-community

Block or report ShixiangWang

Block user

Prevent this user from interacting with your repositories and sending you notifications. Learn more about blocking users.

You must be logged in to block users.

Maximum 250 characters. Please don’t include any personal information such as legal names or email addresses. Markdown is supported. This note will only be visible to you.
Report abuse

Contact GitHub support about this user’s behavior. Learn more about reporting abuse.

Report abuse
ShixiangWang/README.md

Dr. Shixiang Wang | Associate Professor at CSU

Leader of Laboratory of In Silico Oncology and Medicine, and

co-leadership of OncoHarmony Network with Prof. Jian-Guo Zhou.

About

🔬 Research Focus: Bioinformatics · Cancer Genomics · Multi-omics Analysis
🛠️ Development: Developer specializing in open-source tools for reproducible bioinformatics
🎯 Mission: Building accessible workflows and packages for clinical and research bioinformatics

Resources & Links:

Featured Projects

🌟 UCSCXenaShiny — Interactive Shiny app for exploring UCSC Xena datasets
🔧 UCSCXenaTools — R toolkit to access and manipulate UCSC Xena data
⚗️ bregr — Selected research software from WangLab @ CSU
📰 weekly — Openbiox Weekly: curated bioinformatics news and resources
🎓 Tech-Workshop — OncoHarmony Network workshops and teaching materials

Connect with Me

💬 Discussion & Support: GitHub Discussions | Email

bilibili wechat zhihu twitter scholar

GitHub Stats

🐱 My GitHub Data

📦 5.0 MB Used in GitHub's Storage

🏆 2,472 Contributions in the Year 2026

🚫 Not Opted to Hire

📜 100 Public Repositories

🔑 31 Private Repositories

I'm an Early 🐤

🌞 Morning                4469 commits        ████░░░░░░░░░░░░░░░░░░░░░   16.88 % 
🌆 Daytime                10300 commits       ██████████░░░░░░░░░░░░░░░   38.90 % 
🌃 Evening                9068 commits        █████████░░░░░░░░░░░░░░░░   34.25 % 
🌙 Night                  2638 commits        ██░░░░░░░░░░░░░░░░░░░░░░░   09.96 %

📅 I'm Most Productive on Friday

Monday                   4019 commits        ████░░░░░░░░░░░░░░░░░░░░░   15.18 % 
Tuesday                  4078 commits        ████░░░░░░░░░░░░░░░░░░░░░   15.40 % 
Wednesday                4118 commits        ████░░░░░░░░░░░░░░░░░░░░░   15.55 % 
Thursday                 4013 commits        ████░░░░░░░░░░░░░░░░░░░░░   15.16 % 
Friday                   4475 commits        ████░░░░░░░░░░░░░░░░░░░░░   16.90 % 
Saturday                 2749 commits        ███░░░░░░░░░░░░░░░░░░░░░░   10.38 % 
Sunday                   3023 commits        ███░░░░░░░░░░░░░░░░░░░░░░   11.42 %

🤖 AI Coding This Week

No AI Coding Activity Tracked This Week

I Mostly Code in R

R                        99 repos            ████████████░░░░░░░░░░░░░   46.26 % 
HTML                     28 repos            ███░░░░░░░░░░░░░░░░░░░░░░   13.08 % 
Python                   25 repos            ███░░░░░░░░░░░░░░░░░░░░░░   11.68 % 
Rust                     10 repos            █░░░░░░░░░░░░░░░░░░░░░░░░   04.67 % 
SCSS                     4 repos             ░░░░░░░░░░░░░░░░░░░░░░░░░   01.87 %

Last Updated on 16/08/2026 19:23:54 UTC

These Readme stats are generated using github action awesome-readme-stats

NOTE: Top languages does not indicate my skill level or anything like that. It is just a metric of which languages have been hosted by me on GitHub based on the usage across repositories.

Pinned Loading

  1. sigminer sigminer Public

    🌲 An easy-to-use and scalable toolkit for genomic alteration signature (a.k.a. mutational signature) analysis and visualization in R https://shixiangwang.github.io/sigminer/reference/index.html

    R 163 20

  2. openbiox/weekly openbiox/weekly Public

    生信爱好者周刊（每周日发布）

    HTML 461 30

  3. ropensci/UCSCXenaTools ropensci/UCSCXenaTools Public

    📦 An R package for accessing genomics data from UCSC Xena platform, from cancer multi-omics to single-cell RNA-seq https://cran.r-project.org/web/packages/UCSCXenaTools/

    R 118 14

  4. openbiox/UCSCXenaShiny openbiox/UCSCXenaShiny Public

    📊 An R package for interactively exploring UCSC Xena https://xenabrowser.net/datapages/; Book: https://lishensuo.github.io/UCSCXenaShiny_Book; App online: https://shiny.zhoulab.ac.cn/UCSCXenaShiny,…

    R 103 33

  5. openbiox/Cookbook-for-R-Chinese openbiox/Cookbook-for-R-Chinese Public

    📚Cookbook for R 中文翻译

    TeX 143 68

  6. pybook pybook Public

    《交互的Python：数据分析入门》

    134 16