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DO-MS not loading files #25
Description
Describe the bug
Hello, Thank you so much for the amazing software. I have recently updated to DO-MS version 2.0.8 and I have encountered an issue with loading the data on windows computers. I add in the file pathway and when i click the load data button nothing happens. I don't see any form of errors pop up. the only thing i get is a note saying no traceback available.
Thank you,
Activity
tower1ight commentedon Jun 20, 2024
Hi, im seeing the same issue on mac, were you able to get it working?
StephenHol commentedon Jun 20, 2024
Hi, I have got it working but not with the most recent version of R. I had to go back to an earlier version of R. So I have 'R' version 4.2.0 and Rstudio version 2023.03.0+386.pro1 . I seem to be able to run the latest version of DO-MS with that.
tower1ight commentedon Jun 20, 2024
Hmmm, I reverted to that version but I'm still having an issue. Pandoc doesn't seem to be function in markdown so that could be contributing.
edemmott commentedon Sep 16, 2024
Same issue, at least on mac.
edemmott commentedon Sep 16, 2024
Update - issue appears restricted to the Shiny interface. Using the command line version works and generates a report.
edemmott commentedon Sep 16, 2024
Issues under: > sessionInfo()
R version 4.4.1 (2024-06-14)
Platform: aarch64-apple-darwin20
Running under: macOS Sonoma 14.5
Matrix products: default
BLAS: /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libBLAS.dylib
LAPACK: /Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/lib/libRlapack.dylib; LAPACK version 3.12.0
locale:
[1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
time zone: Europe/London
tzcode source: internal
attached base packages:
[1] stats graphics grDevices utils datasets methods base
other attached packages:
[1] htmltools_0.5.8.1 viridis_0.6.5 MASS_7.3-61 ggpubr_0.6.0 viridisLite_0.4.2
[6] yaml_2.3.10 stringr_1.5.1 DT_0.33 rmarkdown_2.28 readr_2.1.5
[11] reshape2_1.4.4 tibble_3.2.1 knitr_1.48 lattice_0.22-6 ggplot2_3.5.1
[16] tidyr_1.3.1 dplyr_1.1.4 shinydashboard_0.7.2 shinyWidgets_0.8.6 pacman_0.5.1
[21] shiny_1.9.1
loaded via a namespace (and not attached):
[1] gtable_0.3.5 xfun_0.47 bslib_0.8.0 htmlwidgets_1.6.4 rstatix_0.7.2 tzdb_0.4.0
[7] crosstalk_1.2.1 vctrs_0.6.5 tools_4.4.1 generics_0.1.3 parallel_4.4.1 fansi_1.0.6
[13] pkgconfig_2.0.3 lifecycle_1.0.4 compiler_4.4.1 textshaping_0.4.0 munsell_0.5.1 fontawesome_0.5.2
[19] carData_3.0-5 httpuv_1.6.15 sass_0.4.9 crayon_1.5.3 later_1.3.2 pillar_1.9.0
[25] car_3.1-2 jquerylib_0.1.4 cachem_1.1.0 abind_1.4-8 mime_0.12 tidyselect_1.2.1
[31] digest_0.6.37 stringi_1.8.4 purrr_1.0.2 fastmap_1.2.0 grid_4.4.1 colorspace_2.1-1
[37] cli_3.6.3 magrittr_2.0.3 utf8_1.2.4 broom_1.0.6 withr_3.0.1 scales_1.3.0
[43] promises_1.3.0 backports_1.5.0 bit64_4.0.5 bit_4.0.5 gridExtra_2.3 ggsignif_0.6.4
[49] ragg_1.3.3 hms_1.1.3 memoise_2.0.1 evaluate_0.24.0 rlang_1.1.4 Rcpp_1.0.13
[55] xtable_1.8-4 glue_1.7.0 vroom_1.6.5 rstudioapi_0.16.0 jsonlite_1.8.8 R6_2.5.1
[61] plyr_1.8.9 systemfonts_1.1.0
janagel commentedon Feb 27, 2025
Hi, just wondering if anyone has found a fix for this? My DO-MS stopped loading files after I updated the shiny version :-/ I have uninstalled both R and Rstudio, re-installed and still no files will load....
edemmott commentedon Apr 26, 2026
While waiting to see if the pull request is approved. I found a fix for this (one line change in ui/import_tab.R) - accessible from my forked version of the repository - https://github.com/emmottlab/DO-MS
Merge pull request #30 from emmottlab/master
edemmott commentedon May 3, 2026
Fix has now been merged, so this issue can be marked closed.