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Pull requests: nextflow-io/nextflow

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Pull requests list

Fix jackson & netty CVEs via api-scoped dependency constraints
#7329 opened Jul 13, 2026 by jorgee Contributor • Draft
1
chore: update dependency ch.qos.logback:logback-classic to v1.5.37
#7327 opened Jul 13, 2026 by seqeralabs-renovate Bot Loading…
1 task
1
chore: update anthropics/claude-code-action action to v1.0.168
#7326 opened Jul 13, 2026 by seqeralabs-renovate Bot Loading…
1 task
1
chore: update actions/checkout action to v6.0.3
#7325 opened Jul 13, 2026 by seqeralabs-renovate Bot Loading…
1 task
1
chore: pin dependencies
#7324 opened Jul 13, 2026 by seqeralabs-renovate Bot Loading…
1 task
1
Bump jackson-databind to patched versions to fix deserialization CVEs
#7322 opened Jul 10, 2026 by jorgee Contributor Loading…
1
Update nf-azure: node communication mode setting, allow Azure Compute Gallery and allow configuration of verification state
#7321 opened Jul 10, 2026 by LennyBEL Loading…
8
Fix Fusion license token cache key not being interpolated
#7320 opened Jul 9, 2026 by robsyme Collaborator Loading…
1
1
Add support for multiple Azure Container Registries
#7318 opened Jul 9, 2026 by adamrtalbot Collaborator Loading…
1
Package directive
#7317 opened Jul 9, 2026 by evanroyrees • Draft
Add managed identity support for Azure Batch container registries
#7316 opened Jul 9, 2026 by adamrtalbot Collaborator Loading…
5
feat(nf-seqera): send pipeline-secret references to the Seqera Scheduler
#7314 opened Jul 8, 2026 by pditommaso Member Loading…
1
ADR: nextflow doctor command
#7311 opened Jul 8, 2026 by edmundmiller Member Loading…
1
build(java): align toolchain and runtime to Java 25 (bytecode 17)
#7310 opened Jul 8, 2026 by cristianrcv Contributor Loading…
1
feat: add plugin directory trust guard to harden shared plugin caches
#7308 opened Jul 8, 2026 by aknownuser Loading…
9
fix: prevent world-readable race window when storing local secrets
#7307 opened Jul 8, 2026 by aknownuser Loading…
2
Add support for authenticated forward HTTP proxies
#7306 opened Jul 7, 2026 by ewels Member Loading…
1
6
Fix AWS Batch task polling forever when the job is missing from the DescribeJobs response
#7302 opened Jul 3, 2026 by item084 Loading…
1
1
Revert the stream swap after the redirect to .command.out and .command.err
#7300 opened Jul 3, 2026 by tcezard Loading…
1
1
Add graceful fallback for array directive with unsupported executors
#7296 opened Jul 2, 2026 by bentsherman Member Loading…
1
2
Round up CPUs to nearest valid value for AWS Batch Fargate executor/aws-batch
#7295 opened Jul 2, 2026 by bentsherman Member Loading…
1
1
Exclude null config env entries from task environment error-improvements
#7294 opened Jul 2, 2026 by bentsherman Member Loading…
1
2
Add support for latest-generation Google Cloud machine families (#6841) executor/google-batch
#7293 opened Jul 2, 2026 by bentsherman Member Loading…
1
Add support for latest-generation Google Cloud machine families (#6841) executor/google-batch
#7292 opened Jul 2, 2026 by bentsherman Member Loading…
1
Document exit logic in task wrapper script software/bash
#7290 opened Jul 1, 2026 by bentsherman Member Loading…
1
1
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