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Open source for Computational Biology

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  1. opencga opencga Public

    An Open Computational Genomics Analysis platform for big data genomics analysis. OpenCGA is maintained and develop by its parent company Zetta Genomics. Found a bug or have an idea for a new featur…

    Java 179 103

  2. cellbase cellbase Public

    High-Performance NoSQL database and RESTful web services to access to most relevant biological data. Found a bug or have an idea for a new feature? Let us know at https://zettagenomics.com/academic/

    Java 95 53

  3. jsorolla jsorolla Public

    JSorolla is a JavaScript Library for biological and genomic data visualization. Found a bug or have an idea for a new feature? Let us know at https://zettagenomics.com/academic/

    JavaScript 40 31

Repositories

Showing 10 of 23 repositories
  • opencga Public

    An Open Computational Genomics Analysis platform for big data genomics analysis. OpenCGA is maintained and develop by its parent company Zetta Genomics. Found a bug or have an idea for a new feature? Let us know at https://zettagenomics.com/academic/

    opencb/opencga's past year of commit activity
    Java 179 Apache-2.0 103 444 13 Updated May 22, 2026
  • java-common-libs Public

    OpenCB common libs project. Found a bug or have an idea for a new feature? Let us know at https://zettagenomics.com/academic/

    opencb/java-common-libs's past year of commit activity
    Java 4 Apache-2.0 28 6 6 Updated Apr 28, 2026
  • jsorolla Public

    JSorolla is a JavaScript Library for biological and genomic data visualization. Found a bug or have an idea for a new feature? Let us know at https://zettagenomics.com/academic/

    opencb/jsorolla's past year of commit activity
    JavaScript 40 Apache-2.0 31 100 3 Updated Mar 12, 2026
  • cellbase Public

    High-Performance NoSQL database and RESTful web services to access to most relevant biological data. Found a bug or have an idea for a new feature? Let us know at https://zettagenomics.com/academic/

    opencb/cellbase's past year of commit activity
    Java 95 Apache-2.0 53 144 22 Updated Mar 12, 2026
  • biodata Public

    Java library that models biological entities and their equivalents in different file formats typically used in bioinformatics. Found a bug or have an idea for a new feature? Let us know at https://zettagenomics.com/academic/

    opencb/biodata's past year of commit activity
    Java 31 Apache-2.0 36 44 7 Updated Mar 5, 2026
  • ci-core Public archive

    Core CI/CD components for OpenCB and Xetabase projects. Centralized reusable GitHub Actions, composite actions, and internal workflows implementing our organization’s opinionated build, test, and release rules.

    opencb/ci-core's past year of commit activity
    0 2 0 0 Updated Jan 16, 2026
  • argus Public archive

    A Python engine for testing and benchmarking REST web services. Found a bug or have an idea for a new feature? Let us know at https://zettagenomics.com/academic/

    opencb/argus's past year of commit activity
    Python 0 Apache-2.0 3 0 0 Updated Nov 20, 2024
  • oskar Public archive

    Oskar implements an analysis suite for working with genomic variation data. Some big data technologies such as Spark are used to provide big data analytics

    opencb/oskar's past year of commit activity
    Java 5 Apache-2.0 2 13 3 Updated May 16, 2023
  • bionetdb Public archive

    BioNetDB implements a storage engine to work with biological networks using a NoQSL Graph database

    opencb/bionetdb's past year of commit activity
    JavaScript 7 Apache-2.0 8 5 3 Updated Nov 15, 2022
  • iva Public archive

    Generic Interactive Variant Analysis browser

    opencb/iva's past year of commit activity
    JavaScript 29 Apache-2.0 18 20 7 Updated Apr 12, 2022
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