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scverse
spatialdata-io
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feat: Updates for 10x Genomics Atera bundles
Test
#1029:
Pull request
#426
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stephenwilliams22
5m 7s
10XGenomics:atera-reader
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feat: Updates for 10x Genomics Atera bundles
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13s
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feat: Updates for 10x Genomics Atera bundles
Test
#1028:
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feat: Updates for 10x Genomics Atera bundles
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#958:
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17s
10XGenomics:atera-reader
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feat: Updates for 10x Genomics Atera bundles
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#957:
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14s
10XGenomics:atera-reader
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feat: Updates for 10x Genomics Atera bundles
Test
#1027:
Pull request
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stephenwilliams22
3m 7s
10XGenomics:atera-reader
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pre_commit in / for https://github.com/biomejs/pre-commit, https://github.com/tox-dev/pyproject-fmt, https://github.com/astral-sh/ruff-pre-commit, https://github.com/zizmorcore/zizmor-pre-commit - Update #1676242928
Dependabot Updates
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github_actions in / for astral-sh/setup-uv, actions/upload-artifact, pypa/gh-action-pypi-publish, dawidd6/action-download-artifact, codecov/codecov-action - Update #1676242921
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pre_commit in /. - Update #1676242794
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Prepare test data
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main
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feat: Updates for 10x Genomics Atera bundles
Test
#1025:
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4m 15s
10XGenomics:atera-reader
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feat: Updates for 10x Genomics Atera bundles
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xenium: label hex cell_ids without label_id; drop degenerate boundary polygons
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13s
timtreis:fix/xenium-hex-cellid-labels
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xenium: label hex cell_ids without label_id; drop degenerate boundary polygons
Test
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3m 40s
timtreis:fix/xenium-hex-cellid-labels
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3m 40s
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feat: rewrite the CosMx reader (stitching, multimodal, co-registration)
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#954:
Pull request
#406
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18s
timtreis:feat/cosmx-reader-rewrite
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feat: rewrite the CosMx reader (stitching, multimodal, co-registration)
Test
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Decode binary string columns in Xenium transcripts
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#953:
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#433
opened by
marcovarrone
2m 16s
marcovarrone:fix/xenium-binary-string-columns
marcovarrone:fix/xenium-binary-string-columns
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Decode binary string columns in Xenium transcripts
Test
#1022:
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#433
opened by
marcovarrone
11m 24s
marcovarrone:fix/xenium-binary-string-columns
marcovarrone:fix/xenium-binary-string-columns
11m 24s
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feat: rewrite the CosMx reader (stitching, multimodal, co-registration)
Test
#1021:
Pull request
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9m 3s
timtreis:feat/cosmx-reader-rewrite
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feat: rewrite the CosMx reader (stitching, multimodal, co-registration)
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1m 29s
timtreis:feat/cosmx-reader-rewrite
timtreis:feat/cosmx-reader-rewrite
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Fix correctness, robustness and memory issues in the MERSCOPE reader
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#951:
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audit/merscope-reader
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Fix correctness, robustness and memory issues in the MERSCOPE reader
Test
#1020:
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56m 8s
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